The detailed information of tRNA gene sequence


Sequence ID>WENV170689004
Genome IDLFRM01271536
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 574
End posion on genome 499
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aagtgcacac
tRNA gene sequence 
GGAGGTTTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCAGCGGTTCGAGC
CCGTTAACCTCCACCA
Downstream region at tRNA end position 
ttatgccgac
Secondary structure (Cloverleaf model)
>WENV170689004	Val	TAC
                   c      ACCA ttatgccgac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     T - A          C G
                    T     T T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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