The detailed information of tRNA gene sequence


Sequence ID>WENV170689037
Genome IDLFRM01273734
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 108
End posion on genome 192
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cgattgcaac
tRNA gene sequence 
GCCGAGGTGGTGGAATAGGTAGACACGCACGTTTGAGGGGCGTGTGGGGTTTCCCGTGGG
GGTTCAAATCCCCCCCTCGGCACCA
Downstream region at tRNA end position 
tgaattgaaa
Secondary structure (Cloverleaf model)
>WENV170689037	Leu	GAG
                   c      ACCA tgaattgaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T A A        G      | | | | |     A
    A       G G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGGGTTTCCCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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