The detailed information of tRNA gene sequence


Sequence ID>WENV170689059
Genome IDLFRM01274872
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 800
End posion on genome 872
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ggcagacaat
tRNA gene sequence 
GCGCGAGTGGCTCAGCGGTGGAGCACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGATCC
CCGTCTCGCGCTCtg
Downstream region at tRNA end position 
aggaatcacc
Secondary structure (Cloverleaf model)
>WENV170689059	Gly	GCC
                   t      TCtg aggaatcacc
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          C T
                    T     T G C C C     A
        G A        G      + | | | |     G
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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