The detailed information of tRNA gene sequence


Sequence ID>WENV170689086
Genome IDLFRM01276211
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2468
End posion on genome 2554
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cgctctcagt
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTTGGGGTTCCCCAGTG
GAAGTTCGAGTCTTCTCTTCGGCACCA
Downstream region at tRNA end position 
cattgatgtt
Secondary structure (Cloverleaf model)
>WENV170689086	Leu	CAG
                   t      ACCA cattgatgtt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTGGGGTTCCCCAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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