The detailed information of tRNA gene sequence


Sequence ID>WENV170689104
Genome IDLFRM01277082
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 825
End posion on genome 750
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggattgatat
tRNA gene sequence 
TCCTCAATAGCTCAGTTGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTTGGTTCGAGT
CCAACTTGAGGAGCCA
Downstream region at tRNA end position 
atctagcatc
Secondary structure (Cloverleaf model)
>WENV170689104	Asn	GTT
                   t      GCCA atctagcatc
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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