The detailed information of tRNA gene sequence


Sequence ID>WENV170689117
Genome IDLFRM01277911
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 328
End posion on genome 242
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tccaattcac
tRNA gene sequence 
GCCGGAGTGGTGGAATTGGTAGACGCAGTGGACTCAAAATCCACCGGGGGCAACCCCTTG
GGAGTTCGAGTCTCCCCTCCGGCACCA
Downstream region at tRNA end position 
gaaaaaacaa
Secondary structure (Cloverleaf model)
>WENV170689117	Leu	CAA
                   c      ACCA gaaaaaacaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G G G A G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGGGGCAACCCCTT
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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