The detailed information of tRNA gene sequence


Sequence ID>WENV170689123
Genome IDLFRM01278327
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9164
End posion on genome 9074
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatacaaat
tRNA gene sequence 
GGAGTAGTACTCAAGAGGCTGAAGAGGTGCCCCTGCTAAGGGCATAGATCGGGAAACCGA
TGCGAGGGTTCAAATCCCTCCTACTCCGCCA
Downstream region at tRNA end position 
tggcccgttg
Secondary structure (Cloverleaf model)
>WENV170689123	Ser	GCT
                   t      GCCA tggcccgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGATCGGGAAACCGATGC
                    T - A
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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