The detailed information of tRNA gene sequence


Sequence ID>WENV170689124
Genome IDLFRM01278327
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9072
End posion on genome 8996
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
actccgccat
tRNA gene sequence 
GGCCCGTTGGAGAAGCGGTTTAACTCACATGCCTTTCACGCATGCATTCACGGGTTCGAA
TCCCGTACGGGTCACCA
Downstream region at tRNA end position 
ttaaactaag
Secondary structure (Cloverleaf model)
>WENV170689124	Glu	TTC
                   t      ACCA ttaaactaag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T T A        A     CATTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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