The detailed information of tRNA gene sequence


Sequence ID>WENV170689162
Genome IDLFRM01280226
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5637
End posion on genome 5719
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aggtacaggc
tRNA gene sequence 
GCGAGGGTAGCCAAGCGGTCAACGGCGGTCGACTCAAGATCGACTCTCAAAGGAGTTCGC
GGGTTCGAATCCCTCCCCTCGCAttt
Downstream region at tRNA end position 
ctggtccggg
Secondary structure (Cloverleaf model)
>WENV170689162	Leu	CAA
                   c      Attt ctggtccggg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      |   | | |     G
    G       A C C G       G C G G G     C
    G         | | |                 T T
    T       C G G C
      C A A        G     TCTCAAAGGAGTTC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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