The detailed information of tRNA gene sequence


Sequence ID>WENV170689168
Genome IDLFRM01281286
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2911
End posion on genome 2835
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccttgttcgt
tRNA gene sequence 
GGGCTCATAGCTCAGACGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAT
TCCATTTGAGCCCACCA
Downstream region at tRNA end position 
aaccgttttg
Secondary structure (Cloverleaf model)
>WENV170689168	Ile	GAT
                   t      ACCA aaccgttttg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     T T A C C     A
      A G A        A      + | | | |     G
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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