The detailed information of tRNA gene sequence


Sequence ID>WENV170689174
Genome IDLFRM01281443
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 541
End posion on genome 466
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgaccataaa
tRNA gene sequence 
GCCCACATAGCTCAGTAGGTAGAGCGCGTCCTTGGTAAGGACGAGGTCAGCAGTTCAATT
CTGCTTGTGGGCTCCA
Downstream region at tRNA end position 
gaaagcaaag
Secondary structure (Cloverleaf model)
>WENV170689174	Thr	GGT
                   a      TCCA gaaagcaaag
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     A - T          T T
                    T     T C G T C     A
      T G A        A      | | | | |     A
    A       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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