The detailed information of tRNA gene sequence


Sequence ID>WENV170689223
Genome IDLFRM01284367
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3704
End posion on genome 3780
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcttaataa
tRNA gene sequence 
GGCGGAATAGCTCAGCTGGCTAGAGCATTCGGTTCATACCCGAAGGGTCGTAGGTTCAAG
TCCTATTTCCGCTACCA
Downstream region at tRNA end position 
caactgctgg
Secondary structure (Cloverleaf model)
>WENV170689223	Met	CAT
                   a      ACCA caactgctgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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