The detailed information of tRNA gene sequence


Sequence ID>WENV170689232
Genome IDLFRM01284901
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6522
End posion on genome 6446
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctctttgcct
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAAGGGTTCGAA
TCCCTCATTCTCCACCA
Downstream region at tRNA end position 
tttgtatatt
Secondary structure (Cloverleaf model)
>WENV170689232	Ala	TGC
                   t      ACCA tttgtatatt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     C T C C C     A
      C G A        A        | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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