The detailed information of tRNA gene sequence


Sequence ID>WENV170689234
Genome IDLFRM01284901
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 373
End posion on genome 297
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aggcttaaat
tRNA gene sequence 
GGGCTTGTAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGGCGATGGTTCAAG
TCCATTCAGGCCCACCA
Downstream region at tRNA end position 
tttatattgt
Secondary structure (Cloverleaf model)
>WENV170689234	Ile	GAT
                   t      ACCA tttatattgt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T T A C C     A
      C G A        A      + | | | |     A
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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