The detailed information of tRNA gene sequence


Sequence ID>WENV170689263
Genome IDLFRM01286125
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1963
End posion on genome 2038
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aatcagttat
tRNA gene sequence 
GGGGTTTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTAATCTCCACCA
Downstream region at tRNA end position 
cttcatgggt
Secondary structure (Cloverleaf model)
>WENV170689263	Ala	TGC
                   t      ACCA cttcatgggt
                     G - C
                     G - C
                     G + T
                     G - C
                     T   T
                     T - A
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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