The detailed information of tRNA gene sequence


Sequence ID>WENV170689332
Genome IDLFRM01288959
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 880
End posion on genome 953
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggaaaccca
tRNA gene sequence 
GGGCTCATAGCTCAGTTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCGGGGGTTCAAAT
CCCCCTGAGTCCACtg
Downstream region at tRNA end position 
ggcaggattc
Secondary structure (Cloverleaf model)
>WENV170689332	Ala	TGC
                   a      ACtg ggcaggattc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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