The detailed information of tRNA gene sequence


Sequence ID>WENV170689347
Genome IDLFRM01290063
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 819
End posion on genome 907
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgcagcaaa
tRNA gene sequence 
GGATGAGTGTCCGAGCGGTCTAAGGAGCACGCCTCGAAAGCGTGTGAGGGCAACCCCCTC
CGCGAGTTCGAATCTCGCCTCATCCGCCC
Downstream region at tRNA end position 
ctagggtttt
Secondary structure (Cloverleaf model)
>WENV170689347	Ser	CGA
                   a      GCCC ctagggtttt
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G A G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TGAGGGCAACCCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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