The detailed information of tRNA gene sequence


Sequence ID>WENV170689365
Genome IDLFRM01291031
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 392
End posion on genome 318
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacggttcat
tRNA gene sequence 
GTCTCCTTCGTCTAGTGGTTAGGACATCGGGTTTTCATCCCGACAACAGGGGTTCAATTC
CCCTAGGAGATGCGA
Downstream region at tRNA end position 
agtctgaaag
Secondary structure (Cloverleaf model)
>WENV170689365	Glu	TTC
                   t      GCGA agtctgaaag
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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