The detailed information of tRNA gene sequence


Sequence ID>WENV170689387
Genome IDLFRM01292229
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 411
End posion on genome 485
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgcgacacgg
tRNA gene sequence 
GCCAGCGTAGCTCAACGGCAGAGCAACTGATTTGTAATCAGTAGGTTGGGGGTTCGATTC
CCTTCGCTGGCTCCA
Downstream region at tRNA end position 
tgcatttccc
Secondary structure (Cloverleaf model)
>WENV170689387	Thr	TGT
                   g      TCCA tgcatttccc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     T T C C C     A
        A A        A      + + | | |     G
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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