The detailed information of tRNA gene sequence


Sequence ID>WENV170689388
Genome IDLFRM01292268
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4
End posion on genome 96
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnnnaac
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTTGGCGGTGCTGAGCT
GTCACGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaacaccc
Secondary structure (Cloverleaf model)
>WENV170689388	Ser	CGA
                   c      GCCA ttaaacaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTGGCGGTGCTGAGCTGTCAC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK