The detailed information of tRNA gene sequence


Sequence ID>WENV170689396
Genome IDLFRM01292756
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13853
End posion on genome 13778
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcccctttaa
tRNA gene sequence 
GACTTCGTAGCTCAGTTGGTAGAGCAAATGACTCTTAATCATTGGGTCGAGGGTTCGAGC
CCCTCCGAGGTCACCA
Downstream region at tRNA end position 
tgcaacacgt
Secondary structure (Cloverleaf model)
>WENV170689396	Lys	CTT
                   a      ACCA tgcaacacgt
                     G - C
                     A - T
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C          C G
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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