The detailed information of tRNA gene sequence


Sequence ID>WENV170689472
Genome IDLFRM01296370
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 38
End posion on genome 110
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atagacttta
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCATCAGGCTGGCAGTCTGAGGGTCGTCGGTTCGAAC
CCGTCCAGCTCCAtaa
Downstream region at tRNA end position 
caaaaaatcc
Secondary structure (Cloverleaf model)
>WENV170689472	Ala	GGC
                   a      Ataa caaaaaatcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C A
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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