The detailed information of tRNA gene sequence


Sequence ID>WENV170689476
Genome IDLFRM01296453
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 134
End posion on genome 210
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtggtccaa
tRNA gene sequence 
GGCCGCGTAGCTCAGTTGGTTAGAGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
TCCGGTCGTGGTCGCGA
Downstream region at tRNA end position 
agtccactca
Secondary structure (Cloverleaf model)
>WENV170689476	Asp	GTC
                   a      GCGA agtccactca
                     G - C
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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