The detailed information of tRNA gene sequence


Sequence ID>WENV170689484
Genome IDLFRM01296695
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 38677
End posion on genome 38601
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgtcaagcg
tRNA gene sequence 
CGGGGTATAGCGCAGCTTGGTAGCGCACCTGGTTTGGGACCAGGGTGTCGGGGGTTCAAA
TCCCTCTACCCCGACCA
Downstream region at tRNA end position 
agttgctaag
Secondary structure (Cloverleaf model)
>WENV170689484	Pro	TGG
                   g      ACCA agttgctaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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