The detailed information of tRNA gene sequence


Sequence ID>WENV170689519
Genome IDLFRM01298634
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 28488
End posion on genome 28573
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaattctat
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCCTGGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGCtt
Downstream region at tRNA end position 
tcaccgacaa
Secondary structure (Cloverleaf model)
>WENV170689519	Ser	GCT
                   t      GCtt tcaccgacaa
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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