The detailed information of tRNA gene sequence


Sequence ID>WENV170689520
Genome IDLFRM01298634
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 32272
End posion on genome 32346
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtatcagtga
tRNA gene sequence 
GGGGTCGTGGGGTAGCCTGGACTATCCTATGGCGTTCGGGATGCTGTGACCTGAGTTCAA
ATCTCAGCGACCCCAttt
Downstream region at tRNA end position 
tagtattaat
Secondary structure (Cloverleaf model)
>WENV170689520	Pro	CGG
                   a      Attt tagtattaat
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        G      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C T A        A     TGAC
                    T + G
                    G + T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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