The detailed information of tRNA gene sequence


Sequence ID>WENV170689525
Genome IDLFRM01298862
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3807
End posion on genome 3731
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ataggtgaat
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGCTAGAGCGCTCGACTGATAATCGTGAGGTCTCAGGTTCAAG
TCCTGATAGGCCCACCA
Downstream region at tRNA end position 
ttaaataatc
Secondary structure (Cloverleaf model)
>WENV170689525	Ile	GAT
                   t      ACCA ttaaataatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     A G T C C     A
      C G A        A      | | | | |     A
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T   T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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