The detailed information of tRNA gene sequence


Sequence ID>WENV170689536
Genome IDLFRM01299509
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10618
End posion on genome 10691
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agtacaagcg
tRNA gene sequence 
GGGCCTATAGCTCAGTTAGGTAGAGCGCCTGGCTTTTAACCAGGTGGTCGGGGGTTCAAA
TCCCCTTGGGCCCGttg
Downstream region at tRNA end position 
ccatgggcga
Secondary structure (Cloverleaf model)
>WENV170689536	Lys	TTT
                   g      Gttg ccatgggcga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     T C C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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