The detailed information of tRNA gene sequence


Sequence ID>WENV170689566
Genome IDLFRM01300993
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 47856
End posion on genome 47931
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cacaccgcac
tRNA gene sequence 
GGGCTCATGGTCTAGCGGTTATGACGTTGCCCTTACACGGCGAAGACCGCCGGTTCGAAT
CCGGCTGAGCCCACCA
Downstream region at tRNA end position 
catccttttt
Secondary structure (Cloverleaf model)
>WENV170689566	Val	TAC
                   c      ACCA catccttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      C G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGACC
                    T - A
                    T + G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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