The detailed information of tRNA gene sequence


Sequence ID>WENV170689567
Genome IDLFRM01300993
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 60190
End posion on genome 60114
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
caggaatcag
tRNA gene sequence 
GCCCGCGTGGGGTAGCTTGGATATCCTAAAAGATTGCGGATCTTTGGACTTGGGTTCGAA
TCCCAGCGCGGGCGCCA
Downstream region at tRNA end position 
ttcttctctc
Secondary structure (Cloverleaf model)
>WENV170689567	Arg	GCG
                   g      GCCA ttcttctctc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     G A C C C     A
    T C G A        G      + | | | |     G
  T         T G G G       T T G G G     C
  G           | | +                 T T
  G         T C C T
    A T A          A     GGAC
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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