The detailed information of tRNA gene sequence


Sequence ID>WENV170689569
Genome IDLFRM01300993
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 45735
End posion on genome 45658
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
gaacacgcac
tRNA gene sequence 
GGACTCGTGGGGTAGCCTGGATTATCCTTTCGGCCTTCGGAGCCGATGACGGGGGTTCGA
ATCCCCCCGGGTCCGCCA
Downstream region at tRNA end position 
ctcttcccag
Secondary structure (Cloverleaf model)
>WENV170689569	Arg	TCG
                   c      GCCA ctcttcccag
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        G      | | | | |     G
  T         T G G G       G G G G G     C
  G           | | +                 T T
  G         T C C T
    A T T A        T     TGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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