The detailed information of tRNA gene sequence


Sequence ID>WENV170689574
Genome IDLFRM01301097
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 49900
End posion on genome 49976
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acccgtcatg
tRNA gene sequence 
GCCGGGTTGGGGTAGCTTGGTTATCCTGAGGGACTGTGGATCCCTCGACTCGGGTTCAAA
TCTCGGACCCGGCCCCT
Downstream region at tRNA end position 
tacttctgtc
Secondary structure (Cloverleaf model)
>WENV170689574	His	GTG
                   g      CCCT tacttctgtc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G G C T C     A
    T C G A        G      + | | + |     A
  T         T G G G       T C G G G     C
  G           | | +                 T T
  G         T C C T
    T T A          G     CGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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