The detailed information of tRNA gene sequence


Sequence ID>WENV170689594
Genome IDLFRM01302625
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 60
End posion on genome 136
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actgaaatgc
tRNA gene sequence 
GGGGTCGTAGTTAAGTCGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGTGGGTTCGAG
TCCCATCGGCCCCGCCA
Downstream region at tRNA end position 
aaagaaataa
Secondary structure (Cloverleaf model)
>WENV170689594	Asp	GTC
                   c      GCCA aaagaaataa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    C       A T T G       G T G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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