The detailed information of tRNA gene sequence


Sequence ID>WENV170689605
Genome IDLFRM01303293
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 765
End posion on genome 689
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgagtattta
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCATCGGTTCGAC
TCCGATATTCTCCACTA
Downstream region at tRNA end position 
caaatttact
Secondary structure (Cloverleaf model)
>WENV170689605	Ala	TGC
                   a      ACTA caaatttact
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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