The detailed information of tRNA gene sequence


Sequence ID>WENV170689624
Genome IDLFRM01304254
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 253
End posion on genome 343
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaaaacac
tRNA gene sequence 
GGAGAGTTGGCTGAGCTGGTCGAAGGCGCATGACTGGAAATCATGTTTACGTGAAAGCGT
AACTAGGGTTCGAATCCCTAACTCTCCGCCA
Downstream region at tRNA end position 
gaaaaaaggt
Secondary structure (Cloverleaf model)
>WENV170689624	Ser	GGA
                   c      GCCA gaaaaaaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       T A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TTTACGTGAAAGCGTAAC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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