The detailed information of tRNA gene sequence


Sequence ID>WENV170689639
Genome IDLFRM01304955
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5963
End posion on genome 5888
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gccgcaccat
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGGGGGTTCGAGT
CCCCTTGTCTCCACCA
Downstream region at tRNA end position 
gattagatca
Secondary structure (Cloverleaf model)
>WENV170689639	Ala	GGC
                   t      ACCA gattagatca
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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