The detailed information of tRNA gene sequence


Sequence ID>WENV170689643
Genome IDLFRM01305096
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 83524
End posion on genome 83598
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agaccgaagT
tRNA gene sequence 
GTCCGGATAGTGTAGGGGCCTATCATGGAGCCCTGTCGAGGCTCCGACTCGGGTTCGAAT
CCCGGTCCGGACGTtt
Downstream region at tRNA end position 
cttttttttg
Secondary structure (Cloverleaf model)
>WENV170689643	Asp	GTC
                   T      GTtt cttttttttg
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      G G A        A      + | | | |     G
    G       T G T G       T C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        G     CGAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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