The detailed information of tRNA gene sequence


Sequence ID>WENV170689680
Genome IDLFRM01306328
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 37655
End posion on genome 37731
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaatcaaac
tRNA gene sequence 
CGCGGGGTGGAGCAGTACGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>WENV170689680	Met	CAT
                   c      ACCA tttattttta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    A       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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