The detailed information of tRNA gene sequence


Sequence ID>WENV170689712
Genome IDLFRM01308086
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 745
End posion on genome 819
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gagtacgtgc
tRNA gene sequence 
AGTCCCATAGCTCAGCGGAAGAGCGTTCCGTTCACACCGGAAAGGTCGCTGGTTCGAACC
CAGTTGGGACTACCG
Downstream region at tRNA end position 
cagccgccgg
Secondary structure (Cloverleaf model)
>WENV170689712	Val	CAC
                   c      ACCG cagccgccgg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T G A C C     A
        G A        A      + | | | |     G
      C     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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