The detailed information of tRNA gene sequence


Sequence ID>WENV170689720
Genome IDLFRM01308282
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 543
End posion on genome 618
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ccatgatttt
tRNA gene sequence 
GCTGATGTAGCTCAGTCGGCAGAGCGTATCCTTGGTAAGGATAAGGTCACCAGTTCAATC
CTGGTCATCAGCTCCA
Downstream region at tRNA end position 
aattgttatt
Secondary structure (Cloverleaf model)
>WENV170689720	Thr	GGT
                   t      TCCA aattgttatt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T G G T C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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