The detailed information of tRNA gene sequence


Sequence ID>WENV170689721
Genome IDLFRM01308282
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 637
End posion on genome 713
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttccataat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCTAGAGCATTCGGTTCATACCCGGAGTGTCCGCGGTTCAAA
TCCGTGCGCCGCCACCA
Downstream region at tRNA end position 
taattannnn
Secondary structure (Cloverleaf model)
>WENV170689721	Met	CAT
                   t      ACCA taattannnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T G C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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