The detailed information of tRNA gene sequence


Sequence ID>WENV170689736
Genome IDLFRM01308912
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1138
End posion on genome 1213
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gaagacacca
tRNA gene sequence 
GCGCCATTAGCTCAATTGGTAGAGCAACTGACTCTTAATCAGTGGGTTCGGGGTTCGAGT
CCCTGATGGCGCACCA
Downstream region at tRNA end position 
cacaaacacc
Secondary structure (Cloverleaf model)
>WENV170689736	Lys	CTT
                   a      ACCA cacaaacacc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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