The detailed information of tRNA gene sequence


Sequence ID>WENV170689759
Genome IDLFRM01310002
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4636
End posion on genome 4561
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cnngtgatgt
tRNA gene sequence 
GGTCCCTTCGTCTAGGGGCCTAGGACGGCGGGTTCTCAGCCCGTTAACAGGGGTTCGAAT
CCCCTAGGGACTGCCA
Downstream region at tRNA end position 
aatataaaag
Secondary structure (Cloverleaf model)
>WENV170689759	Glu	CTC
                   t      GCCA aatataaaag
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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