The detailed information of tRNA gene sequence


Sequence ID>WENV170689776
Genome IDLFRM01310959
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8814
End posion on genome 8887
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgtctttat
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATCCCCAGTTCGAATCT
GGGTGCCGCCTCCA
Downstream region at tRNA end position 
atatagtctg
Secondary structure (Cloverleaf model)
>WENV170689776	Cys	GCA
                   t      TCCA atatagtctg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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