The detailed information of tRNA gene sequence


Sequence ID>WENV170689788
Genome IDLFRM01311504
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2351
End posion on genome 2278
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caacgggcac
tRNA gene sequence 
CGGGGCGTAGCGTAGTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGACCGCAGGTTCGAGT
CCTGTCGCCCCGACgc
Downstream region at tRNA end position 
atgaaccccc
Secondary structure (Cloverleaf model)
>WENV170689788	Pro	TGG
                   c      ACgc atgaaccccc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    G       T G C G       G C A G G     C
    G       + | | |                 T T
    C       G C G C
      T A          G     AGACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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