The detailed information of tRNA gene sequence


Sequence ID>WENV170689799
Genome IDLFRM01311910
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 443
End posion on genome 516
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cattttttct
tRNA gene sequence 
GCGGATGTAGTTCAATGGTAGAACTTCAGCCTTCCAAGCTGATAGCGTGAGTTCGATTCT
CATCATCCGCTCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170689799	Gly	TCC
                   t      TCCA nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T A C T C     A
        A A        A      + | | | |     G
      T     C T T G       G T G A G     C
      G     | | | |                 T T
      G     G A A C
        T A        T     TAGC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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