The detailed information of tRNA gene sequence


Sequence ID>WENV170689815
Genome IDLFRM01312966
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1567
End posion on genome 1493
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gttggggcat
tRNA gene sequence 
TCCTCGATAGCTCAACGGTAGAGCATCCGGCTGTTAACCGGAGGGTTGTAGGTTCGAATC
CTACTCGGGGAGCCA
Downstream region at tRNA end position 
tttagctaac
Secondary structure (Cloverleaf model)
>WENV170689815	Asn	GTT
                   t      GCCA tttagctaac
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C A T C C     A
        A A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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