The detailed information of tRNA gene sequence


Sequence ID>WENV170689859
Genome IDLFRM01314682
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1474
End posion on genome 1547
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
TGGGGTGTAGCCAAGAGGAAAGGCAGCGGACTTTGGATCCGCCACCGATGGTTCGAATCC
ATCCACCCCAGCCA
Downstream region at tRNA end position 
gcagtttttg
Secondary structure (Cloverleaf model)
>WENV170689859	Gln	TTG
                   a      GCCA gcagtttttg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T A C C     A
        G A        A      | | | | |     G
      A     A C C G       G A T G G     C
      G       | | |                 T T
      G     A G G C
        A A        A     CACC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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