The detailed information of tRNA gene sequence


Sequence ID>WENV170689880
Genome IDLFRM01315912
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1817
End posion on genome 1744
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaaccgcaat
tRNA gene sequence 
GGGCTCATGGTCTAGTGGCTATGACGTCTCCCTGACACGGAGGAGGTCGCCGGTTCGAAT
CCGGCTGAGCCCACtc
Downstream region at tRNA end position 
acttatctct
Secondary structure (Cloverleaf model)
>WENV170689880	Val	GAC
                   t      ACtc acttatctct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    C       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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