The detailed information of tRNA gene sequence


Sequence ID>WENV170689887
Genome IDLFRM01316303
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 450
End posion on genome 361
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcagtctaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCTCGCCTGCTAAGTGAGTGGGGCTTTGCCGCCC
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaatataa
Secondary structure (Cloverleaf model)
>WENV170689887	Ser	GCT
                   a      GCCA tttaatataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGGGGCTTTGCCGCCCCC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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